Proteins	Positions within proteins	Leading proteins	Protein	Fasta headers	Localization prob	Score diff	PEP	Score	Delta score	Score for localization	Diagnostic peak	Number of Met->aha(tagMCL)	Amino acid	Sequence window	Modification window	Peptide window coverage	Met->aha(tagMCL) Probabilities	Met->aha(tagMCL) Score diffs	Position in peptide	Charge	Mass error [ppm]	Ratio M/L	Ratio M/L___1	Ratio M/L___2	Ratio M/L___3	Ratio M/L normalized	Ratio M/L normalized___1	Ratio M/L normalized___2	Ratio M/L normalized___3	Ratio M/L unmod. pep.	Ratio M/L localized	Ratio M/L nmods	Ratio M/L variability [%]	Ratio M/L count	Ratio M/L iso-count	Ratio M/L type	Ratio H/L	Ratio H/L___1	Ratio H/L___2	Ratio H/L___3	Ratio H/L normalized	Ratio H/L normalized___1	Ratio H/L normalized___2	Ratio H/L normalized___3	Ratio H/L unmod. pep.	Ratio H/L localized	Ratio H/L nmods	Ratio H/L variability [%]	Ratio H/L type	Ratio H/L count	Ratio H/L iso-count	Ratio H/M	Ratio H/M___1	Ratio H/M___2	Ratio H/M___3	Ratio H/M normalized	Ratio H/M normalized___1	Ratio H/M normalized___2	Ratio H/M normalized___3	Ratio H/M unmod. pep.	Ratio H/M localized	Ratio H/M nmods	Ratio H/M variability [%]	Ratio H/M count	Ratio H/M iso-count	Ratio H/M type	Occupancy L	Occupancy M	Occupancy H	Intensity	Intensity L	Intensity M	Intensity H	Ratio mod/base L	Ratio mod/base M	Ratio mod/base H	Reverse	Potential contaminant	id	Protein group IDs	Positions	Position	Peptide IDs	Mod. peptide IDs	Evidence IDs	MS/MS IDs	Best localization evidence ID	Best localization MS/MS ID	Best localization raw file	Best localization scan number	Best score evidence ID	Best score MS/MS ID	Best score raw file	Best score scan number	Best PEP evidence ID	Best PEP MS/MS ID	Best PEP raw file	Best PEP scan number
sp|Q63HK5|TSH3_HUMAN	419	sp|Q63HK5|TSH3_HUMAN	sp|Q63HK5|TSH3_HUMAN	>sp|Q63HK5|TSH3_HUMAN Teashirt homolog 3 OS=Homo sapiens GN=TSHZ3 PE=1 SV=2	1	49.5899	0.0430049	49.59	21.307	49.59		1	M	HMMVTGHFIKVTNSAMKKGKPIVETPVTPTI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX	VTNSAM(1)K	VTNSAM(49.59)K	6	3	7.0116	0.90293	0.90293	NaN	NaN	1.8978	1.8978	NaN	NaN	NaN	+	1	NaN	1	1	Median	15.789	15.789	NaN	NaN	33.768	33.768	NaN	NaN	NaN	+	1	NaN	Median	1	1	17.487	17.487	NaN	NaN	14.791	14.791	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	72948	3278	2826	66844	NaN	NaN	NaN			0	163	419	419	1124	1185	3289	11421	3289	11421	SET1- 2A- NON LINEAR-1	88562	3289	11421	SET1- 2A- NON LINEAR-1	88562	3289	11421	SET1- 2A- NON LINEAR-1	88562
tr|E9PG92|E9PG92_HUMAN;tr|F6Q0Y6|F6Q0Y6_HUMAN;tr|E7ET46|E7ET46_HUMAN;tr|E7EUL8|E7EUL8_HUMAN;tr|F8WDZ0|F8WDZ0_HUMAN;sp|Q96JB8|MPP4_HUMAN	396;413;447;464;471;471	tr|E9PG92|E9PG92_HUMAN	tr|E9PG92|E9PG92_HUMAN	>tr|E9PG92|E9PG92_HUMAN MAGUK p55 subfamily member 4 OS=Homo sapiens GN=MPP4 PE=4 SV=2;>tr|F6Q0Y6|F6Q0Y6_HUMAN MAGUK p55 subfamily member 4 OS=Homo sapiens GN=MPP4 PE=2 SV=1;>tr|E7ET46|E7ET46_HUMAN MAGUK p55 subfamily member 4 OS=Homo sapiens GN=MPP4 PE=2 	1	42.5986	0.0371765	42.599	24.202	42.599		1	M	QSAVPHTTRTKKSYEMNGREYHYVSKETFEN	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPPXXXXXXXXXXXX	KSYEM(1)NGR	KSYEM(42.6)NGR	5	3	-5.1386	0.076373	0.076373	NaN	NaN	0.077102	0.077102	NaN	NaN	NaN	+	1	NaN	1	1	Median	2.6115	2.6115	NaN	NaN	3.5939	3.5939	NaN	NaN	NaN	+	1	NaN	Median	1	1	34.195	34.195	NaN	NaN	45.148	45.148	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	72378	11598	1260	59520	NaN	NaN	NaN			1	174	396	396	727	761	2118	7406	2118	7406	SET1- 2A- NON LINEAR-1	73166	2118	7406	SET1- 2A- NON LINEAR-1	73166	2118	7406	SET1- 2A- NON LINEAR-1	73166
sp|Q9HB15|KCNKC_HUMAN	371	sp|Q9HB15|KCNKC_HUMAN	sp|Q9HB15|KCNKC_HUMAN	>sp|Q9HB15|KCNKC_HUMAN Potassium channel subfamily K member 12 OS=Homo sapiens GN=KCNK12 PE=2 SV=1	1	40.8832	0.0288232	40.883	11.416	40.883		1	M	DSDAEGRRISGEIISMRDITASNKVSIAIIQ	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXPPPPPPPPPPXXXXXXXXXXXXXX	RISGEIISM(1)R	RISGEIISM(40.88)R	9	3	-7.6154	0.060363	0.060363	NaN	NaN	0.082708	0.082708	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.060541	0.060541	NaN	NaN	0.11955	0.11955	NaN	NaN	NaN	+	1	NaN	Median	1	1	1.0029	1.0029	NaN	NaN	1.1867	1.1867	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	44343	40553	1439	2351	NaN	NaN	NaN			2	184	371	371	862	907	2543	8746	2543	8746	SET1- 2A- NON LINEAR-1	39271	2543	8746	SET1- 2A- NON LINEAR-1	39271	2543	8746	SET1- 2A- NON LINEAR-1	39271
sp|Q9UPN4|AZI1_HUMAN	684	sp|Q9UPN4|AZI1_HUMAN	sp|Q9UPN4|AZI1_HUMAN	>sp|Q9UPN4|AZI1_HUMAN 5-azacytidine-induced protein 1 OS=Homo sapiens GN=AZI1 PE=1 SV=3	1	43.8078	0.0376183	43.808	7.4126	43.808		1	M	AQAQHEIEIKKIKEIMSATEKARREKWISEK	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXPPPPPPPPXXXXXXXXXX	EIM(1)SATEK	EIM(43.81)SATEK	3	4	-2.0137	0.013493	0.013493	NaN	NaN	0.028359	0.028359	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.0053318	0.0053318	NaN	NaN	0.011403	0.011403	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.39516	0.39516	NaN	NaN	0.33425	0.33425	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	393890	386070	5294	2520	NaN	NaN	NaN			3	191	684	684	297	311	848	2834	848	2834	SET1- 2A- NON LINEAR-1	76509	848	2834	SET1- 2A- NON LINEAR-1	76509	848	2834	SET1- 2A- NON LINEAR-1	76509
tr|A6NFW1|A6NFW1_HUMAN	58	tr|A6NFW1|A6NFW1_HUMAN	tr|A6NFW1|A6NFW1_HUMAN	>tr|A6NFW1|A6NFW1_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=2 SV=1	0.999912	40.5726	0.0398539	40.573	16.483	40.573		1	M	SIIEAYAIHKQMRSWMRAVTSI_________	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX	QMRSWM(1)R	QM(-40.57)RSWM(40.57)R	6	3	7.2621	36.822	36.822	NaN	NaN	50.452	50.452	NaN	NaN	NaN	+	1	NaN	1	1	Median																															NaN	NaN	NaN	71552	1512	68528	1512	NaN	NaN	NaN			4	198	58	58	829	873	2441	8321	2441	8321	SET1- 2A- NON LINEAR-1	73202	2441	8321	SET1- 2A- NON LINEAR-1	73202	2441	8321	SET1- 2A- NON LINEAR-1	73202
tr|A8MYC1|A8MYC1_HUMAN	12	tr|A8MYC1|A8MYC1_HUMAN	tr|A8MYC1|A8MYC1_HUMAN	>tr|A8MYC1|A8MYC1_HUMAN Ribonuclease P protein subunit p29 OS=Homo sapiens GN=POP4 PE=2 SV=2	0.980328	16.9752	0.0335499	42.914	28.35	42.914		1	M	____MHCIRKRRMTPMSRYSIFIPIHEIWKQ	X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX	RM(0.02)TPM(0.98)SR	RM(-16.98)TPM(16.98)SR	5	3	7.4332	0.050823	0.050823	NaN	NaN	0.069637	0.069637	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.051677	0.051677	NaN	NaN	0.10205	0.10205	NaN	NaN	NaN	+	1	NaN	Median	1	1	1.0168	1.0168	NaN	NaN	1.203	1.203	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	25057	22289	1258	1510	NaN	NaN	NaN			5	199	12	12	864	909	2545	8750	2545	8750	SET1- 2A- NON LINEAR-1	119856	2545	8750	SET1- 2A- NON LINEAR-1	119856	2545	8750	SET1- 2A- NON LINEAR-1	119856
tr|C9JZ25|C9JZ25_HUMAN	65	tr|C9JZ25|C9JZ25_HUMAN	tr|C9JZ25|C9JZ25_HUMAN	>tr|C9JZ25|C9JZ25_HUMAN HCG1645011, isoform CRA_b OS=Homo sapiens GN=hCG_1645011 PE=4 SV=1	1	52.4819	0.018324	52.482	34.816	52.482		1	M	MRTVIWAINCSRITTMTTSVKMSRIRRRIRI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXPPPPPPPPPXXXXXXXXXX	ITTM(1)TTSVK	ITTM(52.48)TTSVK	4	4	9.5328	0.27427	0.27427	NaN	NaN	0.57646	0.57646	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.30349	0.30349	NaN	NaN	0.64906	0.64906	NaN	NaN	NaN	+	1	NaN	Median	1	1	1.1065	1.1065	NaN	NaN	0.93596	0.93596	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	81933	56722	11849	13362	NaN	NaN	NaN			6	203	65	65	694	726	1958	6773;6774;6775;6776;6777;6778;6779;6780;6781;6782;6783	1958	6775	SET1- 2A- NON LINEAR-1	66823	1958	6775	SET1- 2A- NON LINEAR-1	66823	1958	6775	SET1- 2A- NON LINEAR-1	66823
tr|D6R973|D6R973_HUMAN;tr|D6RFH2|D6RFH2_HUMAN;tr|D6RDN0|D6RDN0_HUMAN;tr|D6R9V8|D6R9V8_HUMAN	1;1;1;1	tr|D6R973|D6R973_HUMAN	tr|D6R973|D6R973_HUMAN	>tr|D6R973|D6R973_HUMAN Protein CDV3 homolog (Fragment) OS=Homo sapiens GN=CDV3 PE=2 SV=1;>tr|D6RFH2|D6RFH2_HUMAN Protein CDV3 homolog OS=Homo sapiens GN=CDV3 PE=2 SV=1;>tr|D6RDN0|D6RDN0_HUMAN Protein CDV3 homolog OS=Homo sapiens GN=CDV3 PE=2 SV=1;>tr|D6R9	1	47.8486	0.0259089	47.849	23.217	47.849		1	M	_______________MQISSEKEEDDNEKRQ	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX	M(1)QISSEK	M(47.85)QISSEK	1	2	3.4171																																														NaN	NaN	NaN	68811	0	68811	0	NaN	NaN	NaN			7	204	1	1	754	792	2245	7787	2245	7787	SET1- 2A- NON LINEAR-1	134204	2245	7787	SET1- 2A- NON LINEAR-1	134204	2245	7787	SET1- 2A- NON LINEAR-1	134204
